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Publications—2011


The publications on this site are being made available to the academic community for
use in teaching and research. All copyrights remain intact.

Peer-Reviewed Journal Articles (Research)

  1. Ribonuclease S redux. Rex W. Watkins, Ulrich Arnold, and Ronald T. Raines (2011). Chemical Communications 47, 973–975. [PubMed] [ [PDF] [Supporting Information]
  2. Functional and structural analyses of N-acylsulfonamide-linked dinucleoside inhibitors of bovine pancreatic ribonuclease. Nethaji Thiyagarajan, Bryan D. Smith, Ronald T. Raines, and K. Ravi Acharya (2011). FEBS Journal 278, 541–549. [PubMed] [PDF] [Supporting Information]
  3. Disruption and formation of surface salt bridges are coupled to DNA binding by integration host factor (IHF): A computational analysis. Liang Ma, Nadia K. Sundlass, Ronald T. Raines, and Qiang Cui (2011). Biochemistry 50, 266–275. [PubMed] [PDF]
  4. Synthesis and utility of fluorogenic acetoxymethyl ethers. Luke D. Lavis, Tzu-Yuan Chao, and Ronald T. Raines (2011). Chemical Science 2, 521–530. [PubMed] [PDF] [Supporting Information]
  5. Conversion of fructose into 5-(hydroxymethyl)furfural in sulfolane. Benjamin R. Caes and Ronald T. Raines (2011). ChemSusChem 4, 353–356. [PubMed] [PDF] [Supporting Information]
  6. Tunable, post-translational hydroxylation of collagen domains in Escherichia coli. Daniel M. Pinkus, Sheng Ding, Ronald T. Raines, and Annelise E. Barron (2011). ACS Chemical Biology 6, 320–324. [PubMed] [PDF] [Supporting Information]
  7. Potentiation of ribonuclease cytotoxicity by a poly(amidoamine) dendrimer. Gregory A. Ellis, Megan L. Hornung, and Ronald T. Raines (2011). Bioorganic & Medicinal Chemistry Letters 21, 2756–2758. [PubMed] [PDF] [Supporting Information]
  8. Quantum mechanical origin of the conformational preferences of 4-thiaproline and its S-oxides. Amit Choudhary, Khian Hong Pua, and Ronald T. Raines (2011). Amino Acids 41, 181–186. [PubMed] [PDF]
  9. Synthesis of conformationally constrained 5-fluoro- and 5-hydroxymethanopyrrolidines. Ring-puckered mimics of gauche- and anti-3-fluoro- and 3-hydroxypyrrolidines. Grant R. Krow, Matthew D. Shoulders, Ram Edupuganit, Deepa Gandla, Fang Yu, Matthew Sender, Philip E. Sonnet, Michael J. Zdilia, Charles DeBrosse, Kevin C. Cannon, Charles W. Ross, III, Amit Choudhary, and Ronald T. Raines (2011). Journal of Organic Chemistry 76, 3626–3634. [PubMed] [PDF] [Supporting Information]
  10. Image of CoverCOVER ARTICLE: Signature of n→π* interactions in α-helices. Amit Choudhary and Ronald T. Raines (2011). Protein Science 20, 1077–1081. [PubMed] [PDF] [Supporting Information]
  11. Interstrand dipole–dipole interactions can stabilize the collagen triple helix. Matthew D. Shoulders and Ronald T. Raines (2011). Journal of Biological Chemistry 286, 22905–22912. [PubMed] [PDF] [Supporting Information]
  12. Site-specific PEGylation endows a mammalian ribonuclease with antitumor activity. Thomas J. Rutkoski, John A. Kink, Laura E. Strong, and Ronald T. Raines (2011). Cancer Biology & Therapy 12, 208–214. [PubMed] [PDF] [Supporting Information]
  13. Site-specific folate conjugation to a cytotoxic protein. Bryan D. Smith, Joshua J. Higgin, and Ronald T. Raines (2011). Bioorganic & Medicinal Chemistry Letters 21, 5029–5032. [PubMed] [PDF] [Supporting Information]
  14. Sensitive fluorogenic substrate for alkaline phosphatase. Michael N. Levine and Ronald T. Raines (2011). Analytical Biochemistry 418, 247–252. [PubMed] [PDF]
  15. Mechanism of ribonuclease A endocytosis: Analogies to cell-penetrating peptides. Tzu-Yuan Chao and Ronald T. Raines (2011). Biochemistry 50, 7835–7841. [PubMed] [PDF]
  16. An n→π* interaction in aspirin: Implications for structure and reactivity. Amit Choudhary, Kimberli J. Kamer, and Ronald T. Raines (2011). Journal of Organic Chemistry 76, 7933–7937.[PubMed] [PDF] [Supporting Information]
  17. Separable fluorous ionic liquids for the dissolution and saccharification of cellulose. Benjamin R. Caes, Joseph B. Binder, Jacqueline J. Blank, and Ronald T. Raines (2011). Green Chemistry 13, 2719–2722. [PDF]  [Supporting Information]
  18. Arginine residues are more effective than lysine residues in eliciting the cellular uptake of onconase. Nadia K. Sundlass and Ronald T. Raines (2011). Biochemistry 50, 10293–10299. [PubMed] [PDF]  

Peer-Reviewed Journal Articles (Reviews)

  1. An evaluation of peptide-bond isosteres. Amit Choudhary and Ronald T. Raines (2011). ChemBioChem 12, 1801–1807. [PubMed] [PDF]
  2. Chemoselectivity in chemical biology: Acyl transfer reactions with sulfur and selenium. Nicholas A. McGrath and Ronald T. Raines (2011). Accounts of Chemical Research 44, 752–761. [PubMed] [PDF]
  3. Bovine pancreatic ribonuclease: Fifty years of the first enzymatic reaction mechanism. Claudi M. Cuchillo, M. Victòria Nogués, and Ronald T. Raines (2011). Biochemistry 50, 7835–7841. [PubMed] [PDF]